Ecological Applications
○ Wiley
Preprints posted in the last 30 days, ranked by how well they match Ecological Applications's content profile, based on 28 papers previously published here. The average preprint has a 0.02% match score for this journal, so anything above that is already an above-average fit.
Ward, E. J.; Anderson, S. C.
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Spatial and spatiotemporal models are increasingly critical for understanding species distributions, tracking population change, and informing conservation decisions. As biological processes are influenced by increasing external pressures, including human disturbance or environmental change, accurate model predictions become essential for adaptive management. However, the reliability of spatial predictions depends on often-overlooked modelling choices, including the spatial resolution used to approximate underlying processes. Using long term monitoring data from a large-scale groundfish survey in the California Current ecosystem, we investigated how spatial model complexity affects the quality of ecological predictions and derived indices used for management. We fit spatial and spatiotemporal models of ocean temperature and fish biomass density for 27 commercially important species using varying levels of spatial resolution. We evaluated both in-sample and out-of-sample prediction, and effects on area-weighted biomass indices. Counter to common assumptions, increasing spatial approximation resolution did not universally improve predictions. Our case studies demonstrate that for many datasets, out-of-sample prediction quality peaked at intermediate spatial resolutions and declined at the finest scales. Through simulation testing, we found this pattern was strongest when spatial patterning had a small range and high spatial variance, and observation error was low. For most species, spatial resolution had a minimal effect on biomass trend estimates used in management, but for several commercially important rockfish species, resolution choices substantially affected both the scale and uncertainty of population indices. Our findings demonstrate that spatial model specification can substantially affect ecological inference, with direct implications for management and conservation planning. We provide practical guidance for ecologists on selecting appropriate spatial complexity through cross-validation. When out-of-sample prediction is a focus, appropriate approximation complexity should improve both parameter estimation accuracy and derived quantities.
Gillies, G. J.; Dungey, M. P.; Eckert, C. G.
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O_LIChanges in habitat structure across species distributions may contribute to the generation and maintenance of range limits, but few studies have evaluated this by directly measuring habitat availability across relevant spatial scales. C_LIO_LIHere, we test the predictions that coarse-scale and patch-level habitat availability decline towards and beyond the northern range limit of Pacific coastal dune endemic Camissoniopsis cheiranthifolia. We used aerial imagery and geographic information system (GIS) tools to measure the coarse-scale availability of coastal dune habitat in California and Oregon. The availability of finer-scale habitat patches specifically suitable for C. cheiranthifolia was measured in a 2-generation field survey of > 4,200 5m x 5m plots randomly distributed across 1100 km of coastal dune habitat transcending the species northern range limit. At each plot, we estimated the proportion of area that contained suitable habitat as well as recorded occupancy by C. cheiranthifolia. As an alternative approach to visually estimating habitat suitability, we recorded plant community composition at each plot to predict beyond-range habitat suitability using a random forest model. C_LIO_LIContrary to our predictions, we found that coastal dune habitat, measured coarsely from aerial imagery, was more abundant and continuous towards and beyond the northern range limit. At the fine scale, however, the proportion of plots with suitable habitat (patch suitability) and the proportion of habitat within plots that was suitable (patch size) declined across the range limit. Moreover, patches were more isolated from one another and, in one survey year, less temporally stable towards and beyond the range limit. Finally, occupancy by C. cheiranthifolia was less likely in smaller, more isolated, and temporally unstable patches, providing mechanistic insight to the previously observed decline in occupancy towards the range limit. C_LIO_LISynthesis: Taken together, our results suggest that fine-scale habitat patch configuration changes in ways that likely impede patch colonization, thereby reducing occupancy and limiting the species northern distribution. Thus, consideration of geographic variation in patch and landscape structure, rather than only coarse-scale habitat availability, may be essential for understanding the processes that limit species ranges. C_LI
Hopf, J. K.; Giraldo-Ospina, A.; Caselle, J.; Kroeker, K.; Carr, M.; Hastings, A.; White, J. W.
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Marine protected areas (MPAs) are increasingly promoted as climate mitigation tools, yet guidance on their placement to maximize resilience against climate stressors like marine heatwaves remains limited. Here, we develop MPA placement guidelines that explicitly consider a mechanistic pathway through which MPAs could enhance kelp forest resilience to heatwaves: protecting fishery-targeted urchin predators to prevent kelp overgrazing. Using a spatially explicit, tri-trophic model of California kelp forests, we evaluate alternative MPA configurations across a hypothetical coastline where half the habitat experiences an increased probability of experiencing heatwaves. We found that effective MPA placement depends on whether MPAs are being newly established or reconfigured within an existing network, and that among-patch connectivity and spillover played vital roles in the relative effectiveness of different MPA configurations. Changes in resilience occurred primarily at the patch scale, with trade-offs between increased within-MPA resilience and decreased resilience in some fished areas, resulting in minimal coastwide population effects. For example, for new MPAs, large single MPAs within heatwave-prone areas maximized within-MPA resilience gains, while multiple small MPAs in heatwave refugia best supported whole-coast resilience. When reconfiguring established networks, expanding existing MPAs in refugia areas was most effective. We also demonstrate the importance of considering MPA recovery timescales: for example, relocating old MPAs to heatwave refugia yielded minimal short-term benefits due to the loss of rebuilt, previously fished, predator biomass. Our findings demonstrate that climate-adaptive marine planning should explicitly consider the spatiotemporal implications of trophic cascades, connectivity, and transient population dynamics to support ecosystem resilience.
Heffernan, P. M.; Murdock, C. C.; Rohr, J. R.
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O_LIAlthough ecological research has long focused on the effects of temperature on population growth, arthropod pests are exposed to a wide variety of environmental factors that affect their performance, such as chemical pesticides targeted against them. Moreover, these environmental factors likely do not act in isolation. Identifying the extent to which abiotic factors interact to affect pest population dynamics can strengthen current and future pest management programs. C_LIO_LIHere, we investigated the extent to which temephos, a common pesticide applied to aquatic environments for mosquito control, influences the thermal performance of juvenile survival and development rate, as well as the intrinsic population growth rate, of the invasive mosquito pest, Aedes aegypti. We implemented a response surface experimental design to measure these traits across seven temperatures and five temephos concentrations and fit temperature- and insecticide-dependent performance curves to assess impacts on the overall performance and the thermal optimum, minimum, and maximum. C_LIO_LITemephos exposure profoundly altered the thermal performance of juvenile survival by reducing survival across all temperatures, shrinking the thermal breadth, and shifting the thermal optimum to warmer temperatures. Through this, temephos also altered the thermal performance of population growth primarily by reducing its thermal breadth. C_LIO_LISynthesis and applications: Our findings demonstrate that interactions between temperature and insecticide exposure can fundamentally reshape pest population dynamics, rather than acting as independent stressors. By quantifying this interaction, we showed that temphos is most effective below the pests thermal optimum, suggesting that larvicides may yield the greatest population suppression in cooler regions or during cooler periods of the year. Incorporating such temperature-dependent efficacy into pest management strategies could improve the timing and spatial targeting of control efforts. More broadly, these results highlight the need to integrate anthropogenic stressors with climatic drivers when predicting pest risk and optimizing management under ongoing environmental change. C_LI
Dimitriou, A.; Gaynor, K. M.; Benson-Amram, S.; Percy, M.; Burton, C.
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Humans are profoundly reshaping the natural world. These changes are giving rise to complex and mutually risky dynamics between people and large carnivores. In protected areas across North America, bears (Ursus sp.) face rapidly rising recreation pressures that can alter their use of the landscape, either displacing them from high-quality habitats or drawing them into human-wildlife conflicts through habituation or attraction to anthropogenic resources. However, disentangling responses to recreation from other drivers can be difficult because human activity covaries with environmental and seasonal processes that also shape bear activity. We leveraged the partial closure of the popular Berg Lake Trail in Mount Robson Park, British Columbia, Canada, to investigate whether black (Ursus americanus) and grizzly bears (Ursus arctos) showed fear, attraction or neutral behavioural responses to varying recreation levels across multiple spatiotemporal scales. To understand both anticipatory responses to predictable patterns of human activity, and reactive responses to hiker events, we used detections from 43 camera traps over two years (July 2023-June 2025). We compared weekly habitat use, daily activity patterns, and direct responses to hikers (using Avoidance-Attraction Ratios; AARs) among camera sites and between open and closed sections of the trail. Our results revealed that both bear species exhibited patterns consistent with fear responses, while some black bear behaviours were also consistent with attraction responses. Both kinds of responses reflect anticipatory strategies rather than reactionary behaviours (i.e., no AAR effect). Neither species avoided recreation spatially at the weekly scale: black bears were detected more at site-weeks with greater recreation intensity, while grizzly bears were consistently detected more at sites closer to hiking trails. However, both species used daily temporal partitioning to avoid direct encounters with humans. These findings demonstrate scope for human-bear coexistence when recreation levels are managed to be moderate and predictable, and bears have sufficient space to segregate from humans during peak times. Thus, successful coexistence will hinge on co-adaptation by both bears and people. Understanding how recreation influences bear behaviour, and the spatiotemporal scale at which that occurs, is critical for guiding effective adaptive management aimed at fostering human-bear coexistence in high-traffic protected areas.
Koehl, M. A. R.; Hadfield, M. G.
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Many benthic marine invertebrates disperse by releasing microscopic larvae carried by ocean currents to new sites, where they must settle into appropriate habitats and metamorphose to recruit. Species whose larvae settle in response to water-borne chemical cues live in topographically complex habitats. To study whether sinking in response to dissolved cues affects retention of larvae within complex habitats exposed to ambient water flow moving faster than larvae sink, we used the reef-dwelling sea slug, Phestilla sibogae, whose competent larvae stop swimming and sink in response to dissolved cue from their prey coral, Porites compressa. We conducted field experiments where dye-labelled water, neutrally buoyant particles, and larval mimics (particles that sank at the velocity of larvae of P. sibogae) were released together upstream of reefs of branching corals to determine if larval sinking in water above and within a reef affects larval retention within the reef. Wave-driven water flow measured above a reef in the field had instantaneous velocities peaking at 0.3 m s-1, driving slow net advection of water shoreward at [~]0.02 m s-1. Much slower wave-driven flow moved through the interstices within the reef. In this field flow, sinking by larval mimics caused their retention within a reef after dye-labelled water and neutrally buoyant particles had left. Such retention of sinking larvae within topographically complex benthic communities enhances successful recruitment by exposing larvae to high concentrations of cue for long periods, allowing them time to sink to surfaces, adhere, and undergo metamorphosis.
Kochanski, J. M.; McFarlane, S. L.; Damschen, E. I.; Gratton, C.
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IntroductionHuman land-use intensification and the resulting habitat loss are primary drivers of insect pollinator declines. Habitat restoration offers a promising approach to counteract these declines, yet landscape-level evaluations of bee responses to restoration and management remain limited. We conducted a two-year, landscape-scale study in Wisconsin, USA, to assess how different intensities of tallgrass prairie restoration and management affect bumble bees (Bombus spp.). ObjectivesThis study aimed to determine whether (1) bumble bee abundance and diversity increase with assisted restoration, and (2) outcomes differ between low-(seeded only) and moderate-intensity (seeded and managed with prescribed fire) interventions. MethodsUsing catch-and-release surveys, we measured bumble bee abundance and diversity at 32 sites representing a gradient in restoration intervention: no intervention (unassisted recovery), low intervention, and moderate intervention. ResultsBumble bee abundance and diversity were higher at assisted restoration sites (low and moderate intervention) than at unassisted sites. Although both tended to be greater at moderate than low intervention intensities, these differences were not statistically significant. Bumble bee community composition also differed across intervention intensity, driven by shifts in dominant species (e.g., B. impatiens and B. griseocollis). Rarer taxa, including endangered and vulnerable species, occurred only at assisted restoration sites, with the largest populations at moderate intervention sites. Across all sites, bumble bee responses were strongly and positively associated with floral abundance, but not with semi-natural habitat in the surrounding landscape. ConclusionOur findings demonstrate that assisted grassland restoration can effectively increase bumble bee abundance and diversity, supporting its value as a conservation practice for pollinators. Implications for Practice: (1) Grassland restorations targeting plant communities can successfully support nontarget pollinators across a range of management intensities and landscape contexts. Adding seeds of pollinator-preferred plants could improve restorations with low floral abundance and diversity. (2) Management of existing restorations is important to maintain abundant floral resources and diverse pollinator communities. Because sites varied widely in prescribed fire use, our findings likely represent a conservative estimate of its benefits, and higher intervention intensity (e.g., repeated seeding, regular fire, mechanical or chemical shrub and invasive plants control) may further enhance outcomes for bumble bees.
Painkow Neto, E.; Silvius, K. M.; Barquero, G.; Neves, D. C.; Fragoso, J. M. V.
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Animal population control is widely used to mitigate conflicts between wildlife and agriculture worldwide. Structured, monitored removals are rare in South America, however, and their consequences for wildlife populations as well as their effectiveness in reducing crop damage are little understood. Using eight years of data from an experimental white-lipped peccary management program in an agricultural mosaic in the Brazilian Cerrado biome, we assess how structured, non-lethal removals affect both peccary demography and second-crop corn damage. Leslie removal models based on 6,619 captured individuals indicated that cumulative removals to approximately 85% of the initial population strongly reduced peccary abundance, with limited demographic compensation despite fluctuations in reproductive output. Corn crop damage, quantified with satellite imagery, declined over time and was correlated with peccary population size. Interannual variation in population growth and juvenile recruitment was poorly explained by climate, fire, or landscape composition. Source-sink dynamics likely play a role in maintaining healthy populations at the regional scale. Together, these results demonstrate that sustained and monitored ungulate removals can reliably reduce population size and agricultural damage, supporting coexistence between wildlife and food crop production in human-dominated tropical landscapes.
Bartl, J.; Berthelsen, A. L.; Winterl, A.; Fox-Clarke, C.; Forcada, J.; Nagel, R.; Hoffman, J.; Fabry, B.
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Population density can influence individual predation risk in colonial breeders through shared vigilance and predator deterrence. We investigated how predator-prey interactions are shaped by population density at two Antarctic fur seal (Arctocephalus gazella) breeding colonies at Bird Island, South Georgia, which differ four-fold in seal density. By deploying autonomous time-lapse cameras, we captured high-resolution images at one-minute intervals throughout the breeding season. Using a YOLOv8 neural network, we identified fur seal adult males, females and pups, as well as three predator-scavenger bird species: giant petrels (Macronectes spp.), brown skuas (Stercorarius antarcticus) and snowy sheathbills (Chionis alba). Abundance patterns corresponded to the known foraging and breeding behaviours of these species. Differences in seal density between the colonies were mainly driven by adult females and their pups, but not adult males. The ratios of predatory birds to pups were markedly lower at the high-density colony, while scavenger to pup ratios remained similar. Spatial analyses revealed that predators were largely excluded from areas of high seal density, whereas scavengers overlapped extensively with pups in both colonies. This study demonstrates the value of remote observation in resolving predator-prey interactions and illustrates how density can shape predation risk in a colonial breeder.
O'Sullivan, J.; Whittaker, C.; Xenakis, G.; Robson, T.; Perks, M.
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Peatlands are an important terrestrial carbon sink which, when drained, can produce substantial CO2 efflux. Low productivity forestry planted on drained peatlands can become a net carbon source if losses from drained soils exceed sequestration by the trees. Decision support tools which assist resource allocation and intervention planning in forest-to-bog restoration are needed to mediate this substantial environmental harm. Predicting carbon mitigation benefits associated with forest-to-bog restoration is a major challenge, however, due to the lack of long-term monitoring programs and the fact that mitigation times depend on processes distant from the intervention. Here we introduce the PEATREST life cycle assessment (LCA) which predicts carbon fluxes associated with forest-to-bog restoration, including due to processes far from restored sites. The LCA estimates mitigation timescales defined as the time following intervention at which the restored peatland is predicted to sequester or store more carbon than the forestry would have if retained. HighlightsO_LIHere we develop a novel forest-to-bog Life cycle assessment (LCA) tool C_LIO_LIThe LCA predicts carbon mitigation times following peatland restoration C_LIO_LIThe model combines a variety of process-based and empirical sub-models C_LIO_LIExample implementations for two different restoration scenarios are explored C_LIO_LISensitivity analysis highlights the model inputs that most impact outcomes C_LI Graphical abstract(A single, concise figure that serves as a visual summary of the main research findings described in your manuscript.) O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=80 SRC="FIGDIR/small/715261v1_ufig1.gif" ALT="Figure 1"> View larger version (18K): org.highwire.dtl.DTLVardef@f243f5org.highwire.dtl.DTLVardef@14bc4c7org.highwire.dtl.DTLVardef@164261borg.highwire.dtl.DTLVardef@1db3b_HPS_FORMAT_FIGEXP M_FIG The PEATREST Life cycle assessment (LCA) generates compound time series of carbon sequestration and carbon storage for two scenarios: the forest-to-bog peatland restoration (PR) and a counterfactual (CF) of forestry retention. By comparing the two scenarios, the LCA predicts the carbon mitigation timescales (vertical dashed lines). These are defined as the time following harvesting at which the peatland is predicted to sequester more (emit less), or to have stored more (lost less) carbon, than the forestry would have if retained. C_FIG
Slooten, E.; Myers, L. S.; Nabe-Nielsen, J.
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We developed an agent-based model (ABM) to assess how area-based controls on fishing methods can reduce fishing mortality and population declines. The model incorporates the behavior and distributions of dolphins and fishing vessels, and realistic displacement of fishing effort when protection is extended. Our case study is New Zealand dolphin - Hectors and Maui dolphins. The model was designed and calibrated using pattern-oriented modeling. Our results show that mortality due to entanglement in fishing gears has been reduced thanks to a gradual increase in dolphin protection. However, current protection is not as effective as previously thought, and scarce populations are negatively affected by Allee effects. Neither national nor international goals for reducing bycatch are met by current dolphin protection. The IUCN has recommended banning gillnet and trawl fisheries in New Zealand waters < 100m deep. For most New Zealand dolphin populations, this would be effective in achieving national and international goals for reducing bycatch. Only two populations would require additional protection. This modelling approach is also suitable for assessing impacts of bycatch and ship strikes for other marine species, making it suitable for informing management decisions in many regions.
Hyman, A. C.; Collins, A.; Ramsay, C.; Allen, M. S.; Wilms, S.; Barbieri, L.; Frazer, T. K.
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Accurate estimation of post-release survival is fundamental to fisheries stock assessment and effective management. Conventional tag-return studies and acoustic telemetry are commonly used to estimate this probability, yet each approach has limitations when applied independently. Using gag (Mycteroperca microlepis) as a case study, we integrated data from a large-scale conventional tagging program and an acoustic telemetry experiment within a discrete-time statistical modeling framework that links relative recapture risk with telemetry-derived fate. This approach enabled estimation of post-release survival across a broad gradient of capture depths representative of recreational fishing conditions. Estimated survival was high in shallow waters ({approx}97%) but declined with increasing capture depth, consistent with depth-related barotrauma. Applying model predictions to depth distributions from the recreational fishery yielded annual and monthly post-release survival probabilities. Annual estimates were consistent with values assumed in recent stock assessments, while monthly values highlighted seasonal patterns potentially relevant for management. This integrated framework advances post-release survival estimation by combining the extensive sample sizes and environmental coverage characteristic of conventional tagging data with the direct fate observations provided by acoustic telemetry, and offers a transferable approach for other highly targeted fisheries.
Peacock, S. J.; Cheung, W. W. L.; Connors, B. M.; Crozier, L. G.; Grant, S.; Hertz, E.; Hunt, B. P. V.; Iacarella, J.; Lagasse, C. R.; Moore, R. D.; Moore, J. W.; Nicolas-Robinne, F.; Porter, M.; Schnorbus, M.; Wilson, S. M.; Connors, K.
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Climate change can affect salmon and steelhead (Oncorhynchus spp.) throughout their anadromous life cycles, yet there have been no assessments of which Canadian populations face the greatest exposure. We developed a framework to quantify relative climate change exposure of salmon and steelhead populations based on the spatial and temporal distribution of different life stages. Exposure was calculated from climate model projections for freshwater and marine climate variables considering unique impact thresholds for each population and life stage. We applied this framework to 60 Conservation Units of Pacific salmon and steelhead in the Fraser River basin, British Columbia. Lake-type sockeye had the highest exposure, driven by elevated stream temperatures during adult freshwater migration and spawning stages and relatively low thermal tolerance of marine stages. Chinook salmon were the next most exposed, while coho, pink, and chum salmon had relatively low exposure. Uniquely, steelhead exposure was driven by high stream temperatures during incubation. Our framework is broadly applicable, and our findings provide critical input for climate change vulnerability assessments and forward-looking resilience planning for Pacific salmon.
Sanchez, S. R.; Schneider, C.; Fangue, N. A.; Lusardi, R. A.; Rypel, A. L.
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Catch inequality--the disproportionate distribution of catch across anglers-- is a fundamental but overlooked driver of recreational fisheries dynamics. Here, we use 11 years (2012-2022) of compulsory angler report cards to characterize long-term catch dynamics in the specialized recreational steelhead (Oncorhynchus mykiss) fishery in California, U.S.A. Spatialized catch data reveal the fishery is principally supported by wild fish, despite evidence of widespread hatchery straying. California steelhead appear to represent the most catch-unequal recreational fishery studied yet, exhibiting a statewide Gini coefficient of 0.81. Across basins, inequality varies substantially but remains relatively stable over time and flow conditions; high inequality is primarily driven by significant proportions of zero-catch anglers. We find the relationship between sample size and inequality measures is especially influential in fisheries data. Hence, we develop a three-prong approach for identifying minimal sample sizes required for robust Gini estimation. Across basins and years, an average minimum of 77 report cards were required for the present fishery. Collectively, these findings demonstrate the necessity of considering catch inequality in fisheries management, particularly when utilizing angler data. Graphical AbstractN.a.
Stukel, M. R.; Landry, M. R.; Decima, M.; Fender, C. K.; Kranz, S. A.; Laiz-Carrion, R. L.; Malca, E.; QUINTANILLA, J. M.; Selph, K. E.; Swalethorp, R.; Yingling, N.
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Using linear inverse ecosystem modeling as a data assimilation tool, we compare spawning grounds of Atlantic and Southern Bluefin Tuna (ABT and SBT, respectively) based on results from field campaigns in the Gulf of Mexico (GoM) and eastern Indian Ocean off northwest Australia (Argo Basin). Both regions are warm, stratified, low-nutrient waters dominated by cyanobacteria (Prochlorococcus). Despite these similarities, the Argo Basin is more productive, with [~]1.5X higher net primary production and nearly 2X higher production of top trophic levels in the model (tuna larvae, planktivorous fish, and predatory gelatinous zooplankton). Higher primary production in the Argo Basin is mainly driven by higher N2 fixation and storm mixing of new nutrients in the upper and lower euphotic zone, respectively. Increased ecosystem efficiency (secondary production of top trophic levels / primary production) results from differences in plankton food web organization. In the GoM, protistan zooplankton are the direct consumers of nearly all phytoplankton production. In contrast, higher rates of herbivory by crustaceans feeding on nanophytoplankton combines with a higher impact of appendicularians on cyanobacteria to convert plankton production into larval tuna prey more efficiently in the Argo Basin. Despite similarities in the proportions of phytoplankton production mediated by cyanobacteria and other picoplankton in both systems, food web pathways to larval tuna and other planktivorous fish are substantially shorter in the Argo Basin. Our results highlight the impact of distinct zooplankton ecological niches on ecosystem efficiency and suggest a need for better inclusion of plankton food-web structure in models simulating climate impacts on fisheries production. HIGHLIGHTSO_LIDeveloped food web models of tuna spawning habitat (Indian Ocean & Gulf of Mexico) C_LIO_LISpawning habitats in the Argo Basin and Gulf of Mexico (GoM) are both oligotrophic C_LIO_LIArgo Basin had higher net primary production in part as a result of nitrogen fixation C_LIO_LIArgo Basin had higher rates of direct herbivory by metazoan zooplankton C_LIO_LIThis resulted in greater ecosystem efficiency in the Argo Basin. C_LI
Martemyanov, V.; Soukhovolsky, V.; Dubatolov, V.; Kovalev, A.; Tarasova, O.
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Methods for estimating and modeling the long-term and short-term adult flight dynamics of the conifer silk moth Dendrolimus superans (Lepidoptera: Lasiocampidae) are examined. The analysis uses light trap adult catch data collected over 21 years, from 2005 to 2025. Three models of adult flight are considered: a flight-initiation model driven by weather factors, an autoregressive model of long-term catch dynamics, and a binary model of seasonal catch. For the flight-initiation model, we propose estimating the accumulated temperature sum ST from the date when the first derivative of the remote sensing vegetation index NDVI becomes positive until the date of the first adult capture of the season. ST is shown to be sufficiently stable across all years of observation, with flight each year beginning after this temperature sum is reached. The second model demonstrates that the long-term light trap catch time series is well described by a second-order autoregressive model AR(2), in which the catch of the current year depends on catches from the two preceding years. This long-term series is compared with a previously studied larval population density series of the Siberian silk moth; both are shown to be AR(2) series with similar coefficient values, which suggesting that adult catch data may serve as a proxy for absolute larval population density. In the third model, we describe the transition from absolute-scale seasonal catch dynamics (number of adults per day) to a binary scale (0, 1), where 0 denotes days on which no adults were attracted to the trap, and 1 denotes days on which at least one individual was captured. The seasonal absolute catch series is thereby transformed into a binary series of zeros and ones, and relationships between adjacent values in such a binary series are examined. A linear relationship between the absolute and binary seasonal dynamics series is demonstrated, making it possible to estimate absolute catches from binary catch values and to analyze seasonal flight in sparse pest populations. This potentially opens new avenues for understanding how outbreak populations function at chronically low density. Author summaryForest pests can cause catastrophic damage, yet predicting their outbreaks remains challenging. During periods of low population density, standard monitoring methods become labor-intensive and uninformative, while the transition to an outbreak often occurs unexpectedly. Using a 21-year dataset of adult Siberian silk moth (Dendrolimus superans) captures from light traps, we developed an approach combining three complementary models. First, we showed that moth flight begins upon reaching a specific temperature sum, with the starting point determined by NDVI vegetation index dynamics rather than a calendar date--making the forecast more ecologically relevant. Second, long-term adult population dynamics follow a second-order autoregressive model AR(2), matching the dynamics previously observed for larval populations. This establishes light trap data as a reliable proxy for absolute population density when ground surveys are impractical. Third, we introduced a method to analyze seasonal flight using binary data (presence/absence of moths per day), which we showed is linearly related to absolute abundance. This enables studying population dynamics during periods of extremely low density, when traditional methods fail. Our approach opens new possibilities for early warning systems to detect when a population risks transitioning from a latent state to an outbreak phase.
Croasdale, E. M.; Saponari, L.; Dale, C.; Shah, N.; Williams, B.; Lamont, T. A. C.
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Coral restoration is recognised as a critical tool to mitigate pantropical degradation of reef ecosystems. Robust monitoring of restoration progress is crucial for projects to evaluate their success, improve practice, and share knowledge. However, traditional visual surveys often fail to capture the full impact of coral restoration on reef function. Therefore, we employed Passive Acoustic Monitoring (PAM) to assess whether the soundscape of a coral restoration site in the Seychelles differs from adjacent healthy and degraded reference reefs. We applied two methods of soundscape analysis: manual detection of unidentified fish sounds; and machine learning-based Uniform Manifold Approximation and Projection analysis. Results were approach-specific: the manual approach highlighted similarities in fish calls between the restoration site and the healthy reference reef, while the machine learning approach extracted broader soundscape patterns, clustering the restoration site alongside the degraded reference reef. Although this is a single-site study, these findings suggest that a) coral restoration alters reef soundscapes, though recovery time may be taxon-specific, and b) multiple metrics are needed to bridge single-taxon and broad soundscape scales. This study contributes to the evolving field of soundscape ecology in coral reef ecosystems, highlighting the utility of PAM in monitoring changes to reef function through coral restoration.
Dimitriou, A.; Benson-Amram, S.; Gaynor, K.; Burton, C.
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The rising demand for outdoor recreation worldwide may be undermining the conservation objectives of protected areas (PAs). We leveraged a natural experiment, in which two adjacent PAs were closed to the public for different durations during the COVID-19 pandemic. Using detections from 39 camera traps in Joffre Lakes and Garibaldi Parks, Canada, from 2020-2022, we examined how recreation influenced mammal habitat use and diversity. Bayesian regression showed weak evidence that, when recreation was higher, detections declined for black bear, mule deer, and marten, while detections of bobcat and hoary marmot shifted closer to trails. Accumulation curves revealed that species richness and diversity were higher in the closed vs. open PA in 2020 (mean differences of -5.04 for richness and -0.33 for Shannon diversity). However, diversity did not decline consistently despite increases in recreation in 2021 and 2022. Notably, several rare species were only detected in the lower-recreation PA, suggesting they may be filtered out of the higher-recreation PA. This emphasizes the need for long-term monitoring to detect delayed and cumulative effects of recreation on mammal communities. Given growing global pressures on biodiversity, we urge PA managers to prioritize adaptive management to assess and balance outdoor recreation with conservation goals.
Villafana, J.; Almendras, D.; Gonzalez-Aragon, D.; Concha, F.; Guzman-Castellanos, A.; Contreras, I.; Buldrini, K.; Oyanadel-Urbina, P.; Sandoval, C.; Miranda, B.; Mazo, G.; Cardenas, F.; Valdivia, M.; Pequeno, G.; Lara, C.; Rivadeneira, M.
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The yellownose skate (Dipturus chilensis) is an endangered skate with a narrow distribution in the southeastern Pacific, facing intense fishing pressure and potential climate threats. Using a species distribution model, we projected the current and future distribution of D. chilensis under contrasting climate change scenarios (SSP1-2.6, SSP2-4.5, and SSP5-8.5) for mid-century (2050) and end-of-century (2100). Our models, which demonstrated robust predictive performance significantly better than random expectations, identified maximum temperature and minimum oxygen as the primary environmental drivers of habitat suitability. Projections revealed a consistent poleward range shift towards the Channels and Fjords of Southern Chile ecoregion across all scenarios. While localized habitat loss was projected in Central Chile and Araucanian ecoregions, particularly under high emissions (SSP5-8.5), these losses were outweighed by southern expansions, leading to a net increase in total suitable habitat by 2100. These findings underscore the critical need for climate-adaptive management strategies, including the protection of emerging southern refugia and dynamic fisheries regulations, to ensure the long-term persistence of D. chilensis.
Craveiro, J.; Bugalho, M.; Vaz, P. G.
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By concentrating rodents along verges, roads can reshape rodent-mediated seed dispersal, yet empirical tests remain scarce. We conducted a two-year field experiment in Mediterranean oak woodlands in southern Portugal to test how seed dispersal varies with distance from roads across road type (paved vs. unpaved) and road-forest context (edge vs. non-edge). We tracked labeled holm oak acorns, recording dispersal distances and the number of dispersal events. The two metrics responded differently to road distance. Dispersal distances changed little with distance from roads in non-edge contexts but increased in edge road-forest contexts (2x longer at 400 m than at 10 m) and showed a year x distance-to-road interaction, with longer dispersal distances farther from roads in the second year (a poor mast year). Dispersal distances were also longer when acorns were deposited under shrubs and in areas of higher tree density, and decreased with greater natural acorn availability. In contrast, the number of dispersal events declined with distance from roads (30% more events at 10 m than at 400 m) and was higher along unpaved than paved roads (39% more events). Dispersal frequency also increased in the poor mast year and with shrub cover. No acorns crossed the road. Thus, road verges can concentrate rodent seed handling but do not increase dispersal distances near roads nor provide cross-road seed connectivity; instead, dispersal outcomes depend on edge context, road type, and microhabitat structure. Management that retains structural cover at verges and the adjacent forest edge (e.g., shrub patches and non-uniform clearing) can harness verge-associated activity to increase acorn deposition in sheltered microsites and promote regeneration farther into forest interiors in roaded landscapes.